Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007330.1 Hibiscus syriacus cultivar Beakdansim tig00019604_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58553

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1357--1395
8
5.0
8
87
6
53
17
0
0
82
0.68
1670--1701
16
1.9
17
93
6
57
31
6
40
21
1.78
18622--18709
2
44.0
2
100
0
176
50
0
0
50
1.00
25703--25786
22
3.7
23
77
13
77
22
35
23
17
1.95
25703--25785
21
3.8
21
76
10
69
22
36
24
16
1.95
33902--33930
2
14.5
2
100
0
58
51
0
0
48
1.00
33759--33922
89
1.8
89
98
0
319
50
9
12
27
1.72
34085--34143
2
29.5
2
100
0
118
50
0
0
49
1.00
35302--35347
23
2.0
23
82
0
56
13
15
8
63
1.52
35675--35840
2
84.5
2
86
5
241
47
1
2
48
1.25
36301--36612
128
2.4
127
82
7
346
29
17
18
34
1.94
46935--46987
19
2.7
19
75
11
54
52
9
16
20
1.71
48790--49305
55
9.4
55
89
1
757
34
12
18
34
1.88
53133--53174
16
2.5
17
92
3
68
40
0
4
54
1.21
53522--53567
22
2.1
22
96
4
85
58
17
0
23
1.38

Tables:   1

The End!