Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007337.1 Hibiscus syriacus cultivar Beakdansim tig00019648_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44440

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1288--1317
14
2.1
14
93
0
51
36
0
10
53
1.35
2995--3473
240
2.0
244
84
6
632
28
9
21
40
1.85
3496--3565
20
3.5
20
90
0
104
42
11
12
32
1.79
6428--6493
30
2.3
28
81
5
78
39
15
3
42
1.62
22952--23032
23
3.5
23
88
3
119
29
22
25
22
1.99
23540--23624
2
42.5
2
97
0
161
49
0
1
49
1.08
26380--26447
30
2.3
30
82
5
84
38
14
4
42
1.66
27271--27433
65
2.6
63
80
8
186
30
22
19
28
1.97
35494--35648
65
2.4
63
81
6
177
30
23
20
25
1.98
42991--43071
23
3.5
23
88
3
119
29
22
25
22
1.99
43577--43633
2
30.0
2
86
10
84
49
0
1
49
1.11

Tables:   1

The End!