Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007339.1 Hibiscus syriacus cultivar Beakdansim tig00019665_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70266

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39706--40067
183
2.0
183
95
0
652
22
8
40
29
1.83
40750--40931
90
2.0
90
87
2
258
29
16
29
24
1.96
45124--45181
28
2.1
27
87
9
82
32
3
18
44
1.67
49581--49892
162
1.9
164
86
5
445
35
15
14
34
1.87
50763--50796
2
17.0
2
100
0
68
50
0
0
50
1.00
51441--51514
30
2.5
30
90
0
112
17
36
32
13
1.89
56336--56396
21
2.8
22
72
5
61
50
13
13
22
1.75
57791--57823
15
2.2
15
89
10
50
24
0
0
75
0.80
66491--66515
12
2.1
12
100
0
50
24
8
8
60
1.52
66546--66607
31
2.0
31
84
9
81
62
0
1
35
1.05

Tables:   1

The End!