Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007345.1 Hibiscus syriacus cultivar Beakdansim tig00019682_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  141317

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2692--2752
21
2.9
21
80
0
68
21
21
24
32
1.98
5558--5620
30
2.1
30
85
5
83
23
25
15
34
1.95
9832--9863
2
16.0
2
100
0
64
50
0
0
50
1.00
12072--12119
11
4.4
11
76
7
53
68
2
4
25
1.18
12615--12659
15
3.0
15
78
12
56
28
0
0
71
0.87
12609--12654
15
3.1
15
75
12
51
34
0
0
65
0.93
13167--13281
60
1.9
60
85
7
162
20
25
32
22
1.98
13822--13876
16
3.4
16
80
7
58
60
0
0
40
0.97
13808--13904
30
3.3
31
80
8
96
59
0
0
40
0.97
27413--27459
3
15.7
3
100
0
94
68
0
0
31
0.90
29657--29772
52
2.2
53
80
7
119
55
5
6
32
1.49
33696--33742
22
2.1
23
88
4
69
34
4
0
61
1.15
43983--44029
22
2.1
23
88
4
69
34
4
0
61
1.15
48582--48646
3
21.7
3
100
0
130
67
0
0
32
0.91
54879--54926
23
2.0
24
88
4
71
33
8
0
58
1.28
55267--55473
103
2.0
103
100
0
414
43
6
12
36
1.69
58476--58534
30
1.9
31
86
3
84
37
10
23
28
1.88
59616--59679
23
2.7
23
90
2
101
20
12
37
29
1.89
59616--59699
23
3.6
23
86
3
96
19
13
40
27
1.88
61365--61411
10
4.3
12
75
22
50
31
0
0
68
0.90
61965--61990
5
5.2
5
100
0
52
0
19
57
23
1.40
63225--63338
60
1.9
60
81
0
138
32
17
14
35
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77434--77486
26
2.0
26
100
0
106
33
11
15
39
1.83
83528--83579
2
26.5
2
86
3
70
46
1
3
48
1.31
91514--91595
28
3.0
27
85
5
103
37
18
19
24
1.94
92640--92754
24
4.8
24
86
4
160
26
11
21
40
1.87
92644--92754
48
2.3
48
92
3
179
26
10
22
40
1.87
99869--100170
148
2.0
148
99
0
597
50
7
7
34
1.59
100880--100952
29
2.5
30
84
4
96
31
4
21
42
1.72
107951--107987
17
2.1
18
95
5
67
16
51
21
10
1.74
107966--107995
13
2.3
13
94
0
51
16
43
26
13
1.85
108011--108159
29
5.2
30
84
6
175
31
5
21
41
1.75
108011--108161
57
2.6
57
81
8
171
31
5
21
41
1.75
113139--113188
24
2.1
24
85
7
66
56
10
16
18
1.67

Tables:   1

The End!