Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007346.1 Hibiscus syriacus cultivar Beakdansim tig00019683_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32397

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1058--1087
15
1.9
16
93
6
53
10
13
20
56
1.65
3406--3476
37
1.9
37
91
0
115
38
7
9
45
1.65
3426--3497
37
1.9
37
83
5
92
38
5
9
45
1.60
9310--9357
24
2.0
24
95
0
87
25
31
16
27
1.97
13212--13537
161
2.0
161
98
0
634
33
13
11
42
1.79
14499--14532
2
17.0
2
100
0
68
50
0
0
50
1.00
14936--14997
2
32.0
2
80
6
74
48
0
0
51
1.00
17001--17067
32
2.1
32
82
0
80
23
10
19
46
1.81
19910--19949
19
2.2
19
86
4
55
40
22
7
30
1.81
21845--21966
63
1.9
63
84
0
163
23
19
16
40
1.91
28917--28942
5
5.2
5
100
0
52
0
19
57
23
1.40
30351--30390
15
2.7
15
96
0
71
25
30
5
40
1.77
31928--31978
25
2.0
25
100
0
102
35
7
27
29
1.85

Tables:   1

The End!