Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007347.1 Hibiscus syriacus cultivar Beakdansim tig00019684_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62972

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7815--7930
53
2.2
53
100
0
232
43
21
6
28
1.78
10602--10688
45
1.9
45
92
0
147
31
13
26
28
1.94
10596--10711
45
2.6
45
84
4
126
35
10
26
27
1.89
13540--13592
26
2.0
26
96
0
97
24
3
13
58
1.51
13778--13807
5
6.0
5
92
0
51
23
60
16
0
1.36
14440--14545
29
3.7
29
81
5
90
24
20
15
39
1.91
14497--14571
29
2.6
29
84
0
87
25
18
16
40
1.91
17210--17237
14
2.0
14
100
0
56
35
7
21
35
1.81
30367--30421
21
2.6
21
91
0
83
27
12
25
34
1.92
37779--37833
26
2.1
26
100
0
110
30
18
18
32
1.95
40583--40757
90
2.0
89
93
1
296
46
6
8
38
1.60
42061--42102
16
2.5
17
92
7
77
40
26
0
33
1.56
46653--46692
21
1.9
21
85
10
55
50
15
12
22
1.77
47119--47167
19
2.6
19
84
9
57
24
28
20
26
1.99
49090--49129
21
1.9
21
90
10
64
55
0
7
37
1.29
55272--55311
16
2.5
16
100
0
80
37
0
40
22
1.54
55792--55840
19
2.6
19
84
9
57
24
28
20
26
1.99

Tables:   1

The End!