Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007354.1 Hibiscus syriacus cultivar Beakdansim tig00019709_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58464

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8791--8840
10
5.6
9
81
13
59
18
10
0
72
1.12
8780--8840
18
3.5
16
81
14
59
16
9
0
73
1.08
8780--8840
8
7.0
8
82
14
68
16
9
0
73
1.08
16779--16811
17
1.9
17
93
0
57
30
0
12
57
1.35
18354--18400
24
2.0
24
86
0
67
23
12
25
38
1.90
20709--20753
23
2.0
23
86
0
63
31
8
4
55
1.51
30762--30804
20
2.3
19
88
8
61
18
6
4
69
1.29
31367--31408
17
2.5
17
77
11
50
28
11
0
59
1.33
34589--34834
69
3.5
68
72
8
156
29
36
10
23
1.89
37646--37709
21
3.0
21
67
13
51
28
18
15
37
1.92
39039--39088
17
2.9
17
84
0
64
42
8
14
36
1.74
40958--40986
12
2.4
12
100
0
58
20
13
31
34
1.92
41468--41512
19
2.4
19
92
0
72
22
15
24
37
1.93
42535--42563
14
2.0
15
93
6
51
62
27
0
10
1.28
42829--42929
45
2.2
46
94
1
177
27
22
6
42
1.79
53143--53187
22
2.0
22
86
0
63
11
33
20
35
1.88
54802--54853
21
2.6
21
90
6
81
32
13
7
46
1.72

Tables:   1

The End!