Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007362.1 Hibiscus syriacus cultivar Beakdansim tig00019755_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55827

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
900--945
22
2.0
23
84
12
60
65
0
6
28
1.17
7087--7189
33
3.1
33
88
0
134
40
22
23
13
1.89
7161--7240
40
2.0
40
85
4
108
40
20
26
13
1.89
30145--30199
26
2.1
26
96
0
101
32
25
14
27
1.95
36967--37040
37
2.0
37
94
0
130
25
9
33
31
1.88
43401--43436
12
3.1
12
84
8
56
16
8
41
33
1.78
43401--43454
23
2.3
23
87
0
72
20
7
42
29
1.79
43401--43434
11
2.9
12
86
8
52
17
8
44
29
1.79
43481--43536
23
2.4
23
96
0
103
33
26
14
25
1.94
43481--43545
23
2.8
23
92
0
94
35
26
12
26
1.91
49899--49965
34
1.9
34
85
14
93
20
11
17
49
1.79

Tables:   1

The End!