Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007375.1 Hibiscus syriacus cultivar Beakdansim tig00019793_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56412

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4077--4105
15
1.9
15
100
0
58
27
0
13
58
1.36
4241--4277
18
2.1
18
95
5
67
40
2
0
56
1.13
11782--11811
3
10.0
3
100
0
60
0
33
33
33
1.58
11931--12017
44
2.0
43
84
6
115
36
4
11
47
1.61
12660--12730
35
2.0
35
97
0
133
25
7
16
50
1.70
13219--13317
42
2.3
43
82
1
119
28
13
22
36
1.91
14654--14758
45
2.3
44
84
7
131
32
20
16
30
1.95
23570--23695
64
1.9
65
90
6
202
31
21
18
28
1.97
28712--28741
15
2.1
14
93
6
51
60
0
40
0
0.97
28854--29095
82
2.9
80
76
7
216
33
17
17
31
1.93
34869--34904
14
2.6
14
100
0
72
55
0
44
0
0.99
34869--34904
2
18.0
2
88
0
54
55
0
44
0
0.99
40839--40887
3
16.3
3
100
0
98
67
0
0
32
0.91
52910--52974
5
13.0
5
79
6
69
72
1
4
21
1.11
53267--53291
9
2.8
9
100
0
50
80
0
0
20
0.72
54886--54939
3
17.7
3
81
14
58
61
0
1
37
1.07
54885--54939
16
3.4
16
82
14
60
60
0
1
38
1.08
54886--54937
11
4.8
11
76
21
56
61
0
1
36
1.07

Tables:   1

The End!