Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007376.1 Hibiscus syriacus cultivar Beakdansim tig00019804_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80113

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105--138
15
2.3
15
100
0
68
35
11
47
5
1.65
1789--2025
119
2.0
116
97
2
447
33
22
11
32
1.90
5505--5548
22
2.0
21
82
4
52
9
38
6
45
1.63
10299--10410
60
1.9
59
83
1
143
34
13
15
36
1.86
15728--15800
21
3.5
20
83
3
83
23
17
24
34
1.96
15748--15796
20
2.4
21
86
3
73
22
18
26
32
1.97
15843--15901
21
2.8
21
76
0
73
18
22
23
35
1.96
17307--17340
16
2.1
17
88
5
52
35
0
0
64
0.94
19481--19766
84
3.4
85
82
7
332
49
6
19
24
1.73
19463--19766
43
7.1
43
82
8
304
48
8
19
23
1.75
19519--19795
129
2.2
128
81
7
303
50
7
17
24
1.71
25554--25626
36
2.1
35
86
2
101
19
9
15
56
1.66
25563--25618
19
3.1
19
70
17
55
21
7
16
55
1.64
27464--27520
2
28.5
2
92
0
96
49
3
0
47
1.18
33367--33503
59
2.4
56
73
13
143
53
4
2
40
1.33
33420--33668
74
3.4
72
75
9
252
49
4
3
42
1.40
33455--33709
147
1.8
140
87
9
353
47
4
3
44
1.38
33683--33729
21
2.2
22
84
3
60
36
2
2
59
1.21
45142--45185
21
2.1
21
91
0
70
38
2
0
59
1.10
48707--48940
104
2.2
104
87
1
326
32
15
21
29
1.94
49552--49597
23
1.9
24
86
8
67
52
0
0
47
1.00
52448--52482
2
17.5
2
100
0
70
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53631--53676
14
3.4
14
76
11
60
13
15
17
54
1.71
53934--53969
14
2.7
13
86
4
54
2
8
27
61
1.39
54529--54553
2
12.5
2
100
0
50
52
0
0
48
1.00
64331--64413
23
3.5
23
79
9
87
53
4
20
21
1.64
64029--65039
507
2.0
501
95
1
1808
52
12
14
20
1.74
69727--69866
59
2.4
59
81
1
163
40
5
23
30
1.78
70897--71054
78
2.0
78
100
0
316
32
17
12
37
1.88
73128--73620
246
2.0
246
94
0
862
23
15
24
36
1.93
74520--74549
15
1.9
16
93
6
53
26
16
13
43
1.85
75065--75184
62
2.0
61
81
1
141
40
4
8
47
1.53

Tables:   1

The End!