Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007382.1 Hibiscus syriacus cultivar Beakdansim tig00019835_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74950

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4067--4117
22
2.2
23
80
16
61
58
5
1
33
1.33
4073--4117
22
2.0
23
87
8
67
60
6
2
31
1.35
4074--4122
22
2.3
20
83
13
55
61
8
2
28
1.36
6110--6161
27
1.9
27
84
0
68
25
7
26
40
1.82
6116--6395
140
2.0
140
85
1
373
31
11
27
30
1.91
6573--6676
52
2.0
52
85
7
140
41
16
3
38
1.66
7230--7256
2
13.5
2
100
0
54
51
0
0
48
1.00
15714--15739
2
13.0
2
100
0
52
0
50
0
50
1.00
20908--20944
2
18.5
2
100
0
74
51
0
0
48
1.00
27860--27888
14
2.1
14
100
0
58
34
0
13
51
1.42
27869--27993
59
2.1
57
82
10
153
36
3
13
46
1.60
33541--33587
22
2.1
23
92
4
78
46
0
12
40
1.42
33615--33648
17
2.0
17
88
0
50
58
0
0
41
0.98
36753--36790
20
1.9
20
100
0
76
31
0
10
57
1.32
36752--36797
20
2.3
20
88
0
74
34
0
8
56
1.30
37354--37390
11
3.5
11
78
14
51
51
5
0
43
1.24
37350--37398
20
2.5
20
100
0
98
51
4
0
44
1.20
37769--37803
2
17.5
2
100
0
70
48
0
0
51
1.00
41470--41542
31
2.3
32
92
2
121
46
10
10
31
1.74
48041--48080
21
1.9
21
84
0
53
45
12
15
27
1.82
52520--52547
2
14.0
2
100
0
56
50
0
0
50
1.00
54154--54185
15
2.1
16
94
5
57
81
6
0
12
0.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61856--61881
13
2.0
13
100
0
52
46
7
15
30
1.74
63016--63077
31
2.0
31
100
0
124
35
16
12
35
1.87
67322--67397
29
2.6
29
100
0
152
17
43
21
18
1.88
69602--69738
60
2.3
61
81
8
165
39
11
13
35
1.82

Tables:   1

The End!