Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007389.1 Hibiscus syriacus cultivar Beakdansim tig00019892_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  104546

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
289--460
54
3.2
54
84
1
220
34
20
18
27
1.95
780--1000
94
2.3
95
80
11
260
27
25
14
32
1.95
7091--7390
54
5.6
54
82
1
350
32
19
18
30
1.95
7734--7937
95
2.1
96
81
10
249
27
24
16
31
1.96
19926--20069
74
1.9
75
83
9
188
31
16
22
29
1.96
20050--20111
28
2.2
28
94
0
106
37
6
24
32
1.81
20469--20933
55
8.5
56
80
7
499
30
20
18
29
1.97
20469--20933
165
2.8
163
86
4
564
30
20
18
29
1.97
31210--31278
19
3.5
19
77
11
66
37
11
21
28
1.89
31593--31696
54
1.9
55
82
9
133
35
8
17
38
1.80
31791--32554
81
9.5
81
84
1
933
34
11
21
32
1.89
31792--32549
323
2.3
322
84
2
966
35
11
21
31
1.89
31791--32554
242
3.2
241
83
3
962
34
11
21
32
1.89
35179--35209
12
2.6
12
100
0
62
25
35
6
32
1.82
36015--36059
23
2.0
23
95
0
81
31
26
6
35
1.82
44276--44602
45
7.2
45
89
1
465
43
10
22
22
1.84
44272--44602
136
2.4
136
89
1
495
43
10
22
22
1.84
67445--67478
16
2.2
15
89
5
50
17
0
23
58
1.38
68059--68116
20
2.9
20
94
0
98
25
34
10
29
1.89
70911--71563
81
8.1
80
85
3
808
30
23
11
34
1.90
77850--77920
23
3.2
22
78
8
81
26
19
26
26
1.99
80744--80773
12
2.5
12
100
0
60
26
23
10
40
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
82178--82354
90
2.0
89
90
1
282
43
7
11
36
1.71
89019--89060
15
2.7
15
79
13
50
50
0
2
47
1.14
89027--89189
89
1.8
89
94
0
290
47
6
9
36
1.63
89857--89964
17
6.2
17
73
8
65
40
12
11
36
1.78
92214--92254
16
2.5
17
84
11
59
53
9
9
26
1.65
92338--92410
38
1.9
38
83
5
94
28
21
24
24
1.99
94706--94768
20
3.2
20
95
0
108
50
4
15
28
1.64
96805--96975
45
3.9
45
79
3
159
30
19
25
24
1.98
96969--97049
39
2.1
39
88
0
117
33
27
23
16
1.95
100801--100906
17
6.1
17
68
12
63
42
7
10
39
1.67

Tables:   1

The End!