Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007392.1 Hibiscus syriacus cultivar Beakdansim tig00019912_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61106

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
637--693
1
57.0
1
82
0
51
87
0
12
0
0.54
637--693
11
5.2
11
89
6
89
87
0
12
0
0.54
637--693
23
2.6
21
89
10
96
87
0
12
0
0.54
1428--1538
43
2.5
44
80
1
125
29
16
21
32
1.95
2197--2230
12
2.8
12
90
0
50
17
17
14
50
1.79
5097--5189
26
3.6
26
83
2
116
32
25
11
30
1.92
6774--6855
32
2.6
32
80
3
103
24
23
31
20
1.98
9519--9563
22
2.0
23
86
4
65
11
4
40
44
1.60
10310--10354
20
2.3
19
80
3
54
35
24
2
37
1.68
15138--15193
3
18.7
3
88
0
76
30
7
0
62
1.22
19136--19180
22
2.0
22
91
0
72
17
8
33
40
1.81
26166--26222
28
2.0
28
93
0
96
17
24
35
22
1.95
28547--28596
19
2.7
18
84
6
73
28
2
0
70
0.99
28543--28595
22
2.4
23
78
6
65
26
1
0
71
0.96
28623--28659
15
2.4
15
90
4
56
35
2
0
62
1.10
28656--28688
7
4.7
7
89
10
50
18
9
0
72
1.10
28650--28688
14
2.9
14
82
17
55
20
7
0
71
1.10
45561--45616
21
2.7
22
81
10
64
32
5
8
53
1.55
45597--45632
16
2.2
17
90
5
56
33
5
11
50
1.61

Tables:   1

The End!