Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007397.1 Hibiscus syriacus cultivar Beakdansim tig00019949_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  106357

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1553--1582
14
2.1
15
93
6
53
50
0
0
50
1.00
7276--7310
2
18.0
2
94
5
63
48
0
0
51
1.00
7402--7426
7
3.6
7
100
0
50
40
0
0
60
0.97
10322--10460
26
5.5
26
85
1
167
15
12
45
26
1.82
10338--10460
49
2.4
51
86
4
160
15
12
45
26
1.81
10685--10724
14
3.1
14
82
17
59
57
0
0
42
0.98
10989--11795
113
7.2
115
85
6
1087
30
17
23
28
1.97
10989--11795
341
2.4
335
91
3
1266
30
17
23
28
1.97
20161--20193
14
2.2
16
89
10
52
57
12
6
24
1.57
37258--37285
14
2.0
14
100
0
56
42
7
21
28
1.79
37825--37948
35
3.5
35
78
8
142
34
16
20
29
1.94
37825--37965
36
3.9
36
79
8
153
34
16
19
29
1.94
37825--37968
72
2.0
72
90
0
225
34
16
20
28
1.94
43226--43265
20
2.0
20
85
4
55
42
10
2
45
1.51
44605--44818
44
4.9
44
95
3
398
39
7
28
24
1.81
44605--44818
85
2.5
87
96
2
396
39
7
28
24
1.81
45139--45171
2
16.5
2
93
0
57
51
0
0
48
1.00
52365--52392
9
3.1
9
100
0
56
78
0
0
21
0.75
52439--52472
17
2.0
17
88
0
50
41
0
0
58
0.98
55275--55335
26
2.3
27
80
8
70
31
9
8
50
1.65
55485--55532
24
2.0
24
95
0
87
39
16
29
14
1.88
56766--56808
2
21.5
2
100
0
86
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57844--57880
2
18.5
2
100
0
74
51
0
0
48
1.00
58180--58226
23
2.0
23
83
0
58
21
17
10
51
1.75
59020--59045
12
2.2
12
100
0
52
46
7
15
30
1.74
62495--62547
19
2.8
18
88
8
79
56
0
0
43
0.99
62497--62558
19
3.3
19
84
10
58
56
1
0
41
1.09
66448--66484
18
2.1
18
94
0
65
56
18
16
8
1.64
69966--70032
25
2.4
28
83
11
77
58
8
2
29
1.44
82319--82386
34
2.0
34
97
0
127
39
20
11
27
1.88
85879--85930
22
2.3
23
87
6
72
34
0
1
63
1.06
87048--87083
14
2.6
14
90
0
54
58
5
11
25
1.54
92614--92659
23
2.1
21
84
8
56
63
0
0
36
0.95
93486--93517
2
16.0
2
100
0
64
50
0
0
50
1.00
94016--94065
18
2.8
18
78
0
55
68
0
8
24
1.16
94090--94156
34
2.0
34
82
11
84
61
5
0
32
1.20
95669--96233
105
5.4
105
97
0
1049
23
18
25
32
1.97

Tables:   1

The End!