Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007398.1 Hibiscus syriacus cultivar Beakdansim tig00019954_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69730

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1461--1504
22
2.0
22
86
0
61
40
31
4
22
1.74
12135--12249
61
1.9
61
85
7
162
26
17
26
30
1.97
12359--12492
45
3.0
45
92
2
227
39
5
23
30
1.79
17395--17425
13
2.4
13
94
0
53
16
19
48
16
1.81
24445--24520
29
2.6
28
81
6
89
43
26
7
22
1.80
24582--24629
9
5.1
9
85
5
60
37
29
18
14
1.91
24582--24635
10
5.6
10
82
6
67
37
27
20
14
1.92
24582--24635
19
2.8
20
83
5
67
37
27
20
14
1.92
35050--35111
24
2.6
24
76
0
61
58
14
8
19
1.61
38727--38773
24
2.0
24
83
8
60
59
10
0
29
1.31
40483--40894
45
9.2
45
87
0
556
22
21
12
42
1.86
47144--47244
30
3.4
30
76
5
105
44
6
18
29
1.76
51027--51535
54
9.4
54
86
0
660
31
17
16
34
1.93
59576--59625
20
2.5
21
83
6
59
40
10
26
24
1.86
60032--60453
54
7.8
54
81
4
472
32
16
16
35
1.91
60032--60453
108
3.9
108
84
0
520
32
16
16
35
1.91
60032--60453
217
1.9
217
84
1
551
32
16
16
35
1.91
61172--61676
54
9.4
54
84
1
602
28
20
18
32
1.96
61172--61676
162
3.1
161
85
2
665
28
20
18
32
1.96
62097--62141
18
2.5
18
88
0
72
31
26
11
31
1.91

Tables:   1

The End!