Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007399.1 Hibiscus syriacus cultivar Beakdansim tig00019968_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56336

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10716--10758
22
2.0
22
85
0
59
20
9
13
55
1.66
11253--11356
34
3.1
34
77
2
102
32
14
20
32
1.92
13244--13307
27
2.2
29
81
15
80
39
0
6
54
1.26
27170--27220
12
4.1
12
76
18
59
66
9
7
15
1.43
30068--30097
13
2.3
13
94
0
51
43
6
36
13
1.70
33892--33938
19
2.5
19
96
3
87
53
31
14
0
1.42
34756--34812
29
2.0
29
96
3
107
45
12
7
35
1.69
35170--35397
42
5.4
42
80
6
221
30
19
24
26
1.98
35179--35377
84
2.3
83
83
6
249
29
20
23
27
1.99
35179--35427
85
2.9
85
80
6
263
30
20
21
28
1.98
35287--35427
42
3.3
42
79
8
115
31
21
19
27
1.97
35464--35527
27
2.4
27
94
0
110
37
23
1
37
1.65
35571--35673
21
4.9
21
96
0
188
51
22
5
20
1.68
47944--47993
10
5.6
9
81
13
59
18
10
0
72
1.12
47933--47993
18
3.5
16
81
14
59
16
9
0
73
1.08
47933--47993
8
7.0
8
82
14
68
16
9
0
73
1.08

Tables:   1

The End!