Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007402.1 Hibiscus syriacus cultivar Beakdansim tig00019977_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49166

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5782--5823
22
2.0
22
90
9
70
4
40
23
30
1.75
11008--11104
39
2.5
39
91
3
153
47
10
12
29
1.74
11058--11089
16
2.1
15
94
5
55
50
6
6
37
1.53
11777--11808
5
6.4
5
100
0
64
37
0
0
62
0.95
14467--14495
2
14.5
2
100
0
58
48
0
0
51
1.00
15673--15724
25
2.2
22
83
10
59
26
7
5
59
1.48
17342--17414
22
3.3
22
98
0
137
34
8
21
35
1.84
27495--27519
2
12.5
2
100
0
50
0
52
0
48
1.00
29119--29172
25
2.2
25
86
6
74
33
7
0
59
1.25
30204--30235
16
2.0
16
100
0
64
25
18
43
12
1.85
33507--33545
17
2.4
16
83
8
51
38
0
2
58
1.12
34941--34990
25
2.0
25
96
0
91
58
0
8
34
1.28
38897--38947
17
2.9
17
75
11
50
64
7
0
27
1.21
45017--45619
127
4.8
128
92
3
1033
21
23
21
32
1.98
45017--45619
253
2.4
253
95
1
1095
21
23
21
32
1.98
45977--46048
34
2.2
33
85
7
92
40
2
5
51
1.40
46556--46622
21
3.2
21
81
8
73
20
20
35
22
1.96
47182--47224
21
2.0
21
82
13
52
58
6
0
34
1.25
48340--48423
32
2.5
33
81
11
91
57
2
0
40
1.12

Tables:   1

The End!