Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007412.1 Hibiscus syriacus cultivar Beakdansim tig00020033_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97587

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
637--791
82
1.9
83
89
6
244
16
21
18
42
1.89
9081--9175
42
2.3
42
88
0
145
36
25
26
11
1.90
12427--12546
56
2.1
57
98
1
233
18
10
6
64
1.47
12429--12522
31
3.2
31
61
27
78
17
11
7
63
1.49
13716--13929
15
14.3
15
91
1
313
45
10
21
22
1.82
14613--14651
14
2.9
14
88
11
64
41
0
7
51
1.31
14615--14644
12
2.5
12
100
0
60
43
0
6
50
1.28
20035--20394
181
2.0
177
93
2
621
26
11
18
43
1.84
27948--27999
2
26.0
2
100
0
104
50
0
0
50
1.00
29773--29871
10
10.3
9
78
12
99
15
26
28
30
1.96
29773--29871
19
5.2
18
80
9
99
15
26
28
30
1.96
29773--29871
29
3.4
28
88
5
135
15
26
28
30
1.96
29868--29910
22
2.0
22
95
0
77
20
48
20
9
1.77
30786--30862
31
2.5
31
82
2
100
14
25
31
28
1.95
30786--30909
63
2.0
63
82
6
153
16
27
29
26
1.97
34382--34426
23
2.0
23
86
0
63
51
2
8
37
1.46
34445--34506
29
2.1
29
96
0
115
58
9
4
27
1.50
35121--35180
22
2.7
22
100
0
120
55
3
3
38
1.33
37931--37975
18
2.5
18
82
7
56
8
8
42
40
1.67
38023--38082
3
19.3
3
89
6
93
66
0
0
33
0.92
40177--40276
42
2.4
42
94
0
173
38
24
24
14
1.92
45005--45052
24
2.0
24
100
0
96
41
20
12
25
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53481--53547
9
7.0
9
75
12
62
16
25
31
26
1.96
53476--53547
19
3.7
19
90
3
99
18
26
30
25
1.98
53541--53603
17
3.7
17
93
0
108
17
42
25
14
1.87
53583--53610
12
2.3
12
100
0
56
17
42
25
14
1.87
53588--53649
7
9.4
7
83
13
87
16
32
29
22
1.95
53600--53645
13
3.5
13
96
3
83
15
30
30
23
1.95
53588--53649
20
3.2
20
90
6
92
16
32
29
22
1.95
60221--60290
9
7.3
9
73
12
59
18
27
28
25
1.98
60220--60290
19
3.7
19
88
1
97
19
26
28
25
1.99
60287--60341
17
3.2
17
94
0
83
18
45
25
10
1.82
60331--60380
7
7.4
7
91
8
86
16
30
30
24
1.96
60331--60376
13
3.5
13
96
3
83
15
30
30
23
1.95
60331--60380
20
2.5
20
93
6
84
16
30
30
24
1.96
63155--63189
15
2.3
15
90
0
52
45
8
25
20
1.79
66814--66843
2
15.0
2
92
0
51
53
0
0
46
1.00
79390--79428
2
19.5
2
100
0
78
48
0
0
51
1.00
80403--80436
2
17.0
2
100
0
68
50
0
0
50
1.00
81195--81351
83
1.9
84
92
4
264
16
21
19
42
1.90
89675--89769
42
2.3
42
88
0
145
36
25
26
11
1.90
93016--93110
31
3.2
31
64
24
87
16
11
7
64
1.48
93014--93133
57
2.1
57
100
0
240
18
10
6
65
1.45
94295--94508
15
14.3
15
92
0
313
45
10
21
22
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
95191--95229
14
3.0
13
92
7
62
41
0
7
51
1.31
95191--95224
14
2.4
14
100
0
68
44
0
5
50
1.26

Tables:   1

The End!