Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007414.1 Hibiscus syriacus cultivar Beakdansim tig00020039_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60632

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8423--8474
18
2.7
19
79
11
61
76
1
19
1
0.97
14134--14190
23
2.5
23
85
0
87
63
10
15
10
1.52
23596--23766
90
1.9
91
90
1
272
23
26
22
26
2.00
28323--28361
6
6.2
6
88
11
60
0
20
0
79
0.73
28323--28361
13
3.1
12
92
7
60
0
20
0
79
0.73
28323--28361
19
2.1
19
90
9
62
0
20
0
79
0.73
28546--28590
17
3.1
14
84
15
56
64
0
20
15
1.29
28548--28590
5
8.6
5
85
14
54
62
0
20
16
1.32
28548--28590
9
4.3
10
81
18
54
62
0
20
16
1.32
42138--42179
22
1.9
22
90
0
66
35
42
2
19
1.64
47828--47939
35
3.2
35
78
3
118
27
34
4
33
1.77
49230--49271
22
1.9
22
90
9
68
16
9
4
69
1.33
49590--49643
9
5.5
10
78
10
58
85
9
3
1
0.80
49589--49650
28
2.2
28
88
2
88
80
12
4
1
0.94
52895--54005
403
2.8
403
97
0
2079
33
18
18
29
1.94
54637--54677
11
3.7
11
87
6
57
17
12
0
70
1.16
58292--58338
24
1.9
25
83
12
62
46
2
8
42
1.46

Tables:   1

The End!