Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007423.1 Hibiscus syriacus cultivar Beakdansim tig00020105_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64953

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2512--2543
16
2.0
16
93
0
55
46
6
0
46
1.27
2728--2773
24
1.9
24
81
0
56
47
15
15
21
1.81
4224--4256
13
2.5
13
100
0
66
15
24
12
48
1.78
6093--6137
3
15.0
3
100
0
90
66
0
0
33
0.92
10104--10179
31
2.4
32
74
8
77
21
27
25
26
1.99
14220--14304
42
2.0
42
95
0
152
34
23
22
20
1.97
16405--16513
23
4.5
23
70
18
62
46
1
6
44
1.39
16461--16608
10
15.9
9
74
21
53
51
1
8
39
1.40
16468--16504
2
19.0
2
84
15
51
48
0
2
48
1.15
16479--16533
23
2.5
22
82
5
65
56
1
5
36
1.33
16524--16579
14
3.7
14
76
17
58
55
1
5
37
1.33
16529--16581
8
6.6
8
83
12
56
54
1
5
37
1.35
16916--17028
50
2.3
50
89
1
165
38
9
21
30
1.86
16966--17013
20
2.4
20
85
0
60
37
4
22
35
1.74
17055--17095
20
2.0
20
90
9
66
34
21
14
29
1.93
23378--23420
20
2.2
20
91
0
68
18
4
20
55
1.60
24977--25019
21
2.0
21
90
4
68
37
16
18
27
1.92
25980--26022
8
6.0
7
82
12
52
53
0
2
44
1.13
26036--26283
2
128.5
2
67
21
75
43
2
8
45
1.48
26047--26077
11
2.8
11
95
0
53
41
3
0
54
1.16
26248--26330
43
2.0
41
83
4
103
40
4
13
40
1.65
27073--27105
15
2.2
15
100
0
66
39
12
30
18
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27209--27233
13
1.9
13
100
0
50
12
16
0
72
1.13
28886--28914
12
2.4
12
100
0
58
37
6
37
17
1.76
33255--33285
15
2.0
15
93
6
53
48
6
0
45
1.28
33470--33515
24
1.9
24
81
0
56
47
15
15
21
1.81
36821--36850
3
10.0
3
100
0
60
66
0
0
33
0.92
40751--40826
31
2.4
32
74
8
77
21
27
25
26
1.99
44157--44241
42
2.0
42
95
0
152
34
23
22
20
1.97
46740--46794
23
2.5
22
82
5
65
56
1
5
36
1.33
46790--46847
8
7.5
8
78
18
52
50
1
6
41
1.39
46740--46840
30
3.5
28
80
10
107
54
1
5
37
1.36
47286--47398
50
2.3
50
84
1
147
38
9
20
30
1.85
47336--47383
20
2.4
20
85
0
60
37
4
22
35
1.74
53724--53766
20
2.2
20
91
0
68
18
4
20
55
1.60
56315--56358
15
2.9
15
83
13
54
52
0
2
45
1.13
56372--56414
11
3.9
11
77
22
54
44
2
0
53
1.13
56449--56548
37
2.8
36
73
10
98
40
3
10
47
1.52
56504--56593
2
46.0
2
73
8
51
37
3
10
48
1.53
56500--56592
49
1.9
48
91
2
150
35
3
11
49
1.56
56597--56625
14
2.0
15
93
6
51
34
6
13
44
1.71
57378--57410
15
2.2
15
100
0
66
39
12
30
18
1.87
57514--57538
13
1.9
13
100
0
50
12
16
0
72
1.13
59179--59207
12
2.4
12
100
0
58
37
6
37
17
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63485--63515
15
2.0
15
93
6
53
48
6
0
45
1.28
63696--63741
24
1.9
24
81
0
56
47
15
15
21
1.81

Tables:   1

The End!