Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007424.1 Hibiscus syriacus cultivar Beakdansim tig00020106_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62581

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48--72
13
1.9
13
100
0
50
40
0
0
60
0.97
2920--2960
14
2.9
14
100
0
82
51
7
0
41
1.30
3646--3860
15
14.3
15
92
0
322
22
21
10
45
1.82
5051--5145
31
3.2
31
64
24
87
64
7
11
16
1.48
5028--5147
57
2.1
57
100
0
240
65
6
10
18
1.45
8391--8488
42
2.3
42
87
0
151
11
27
24
36
1.89
16842--16998
84
1.9
84
92
4
264
42
19
21
16
1.90
18757--18793
2
18.5
2
100
0
74
51
0
0
48
1.00
21905--21940
16
2.2
16
90
0
54
58
5
5
30
1.44
28501--28716
111
1.9
111
100
0
432
39
20
14
25
1.90
30154--30235
29
2.8
29
94
1
137
32
14
9
42
1.79
34922--35003
29
2.8
29
94
1
137
32
14
9
42
1.79
40047--40131
31
2.7
31
100
0
170
43
10
0
45
1.38
40765--40805
22
2.0
22
85
9
59
39
7
7
46
1.60
45125--45164
14
2.9
14
100
0
80
52
7
0
40
1.30
45849--46063
15
14.3
15
92
0
322
22
21
10
45
1.82
47234--47356
58
2.1
58
100
0
246
65
6
10
17
1.45
50607--50704
42
2.3
42
87
0
151
11
27
24
36
1.89
59038--59194
84
1.9
84
92
4
264
42
19
21
16
1.90
59952--59979
2
14.0
2
100
0
56
50
0
0
50
1.00
60943--60983
2
20.5
2
100
0
82
51
0
0
48
1.00

Tables:   1

The End!