Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007433.1 Hibiscus syriacus cultivar Beakdansim tig00020238_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68182

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
626--682
16
3.6
16
90
0
96
56
21
12
10
1.65
1421--1464
14
3.1
14
80
0
61
61
11
9
18
1.55
1433--1481
24
2.0
24
88
0
71
59
16
10
14
1.61
4101--4143
20
2.2
20
87
4
61
32
9
9
48
1.67
4667--4713
13
3.2
16
80
17
57
17
19
0
63
1.30
4688--4716
13
2.3
13
94
5
51
13
17
0
68
1.20
8119--8161
20
2.2
20
87
4
61
32
9
9
48
1.67
8708--8748
12
3.3
12
96
3
73
14
17
0
68
1.22
17292--17364
34
2.1
35
85
7
96
72
4
6
16
1.22
18668--18719
21
2.6
21
90
6
81
34
13
5
46
1.67
19772--19855
35
2.4
35
82
4
98
30
2
36
29
1.70
22261--23017
381
2.0
381
99
0
1487
35
17
16
30
1.92
30013--30050
14
2.6
15
79
8
51
2
15
5
76
1.08
32928--32967
19
2.0
20
86
13
57
25
12
0
62
1.30
33242--33291
14
3.9
13
73
21
52
78
2
20
0
0.86
33236--33291
19
3.1
18
82
17
71
78
1
19
0
0.84
37535--37574
19
2.0
20
86
13
57
25
12
0
62
1.30
41408--41459
21
2.6
21
90
6
81
34
13
5
46
1.67
43931--43982
24
2.2
25
79
10
63
59
15
17
7
1.58
45293--45347
24
2.3
25
81
6
60
32
16
21
29
1.95
47830--47898
33
2.1
33
83
5
86
31
1
36
30
1.67
52289--52357
33
2.1
33
86
5
95
31
0
36
31
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66190--66238
19
2.5
20
86
3
64
46
6
12
34
1.66

Tables:   1

The End!