Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007438.1 Hibiscus syriacus cultivar Beakdansim tig00020281_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56732

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3037--3076
20
2.1
18
86
9
53
72
2
0
25
0.97
4185--4241
19
3.2
18
85
11
73
19
28
21
31
1.97
8325--8369
23
2.0
23
81
0
54
22
40
20
17
1.92
8361--8406
24
1.9
24
90
0
74
19
30
21
28
1.98
11107--11158
19
2.7
19
78
3
59
34
15
26
23
1.94
11547--11908
56
6.5
56
90
3
568
35
11
16
35
1.85
11545--11918
167
2.2
168
90
3
596
36
10
16
36
1.84
18254--18299
16
2.9
15
90
6
56
41
15
10
32
1.82
19335--19380
16
2.9
15
90
6
56
41
15
10
32
1.82
20410--20454
16
2.8
15
90
6
54
40
15
11
33
1.83
21483--21528
16
2.9
15
90
6
56
41
15
10
32
1.82
22564--22609
16
2.9
15
90
6
56
41
15
10
32
1.82
29822--29876
22
2.7
20
80
8
56
32
12
25
29
1.93
30203--30262
29
2.1
29
93
0
102
51
6
11
30
1.64
31965--31989
12
2.1
12
100
0
50
48
0
0
52
1.00
32367--32443
22
3.2
25
62
20
63
25
5
12
55
1.58
32347--32446
48
2.1
48
100
0
200
27
6
10
57
1.55
33026--33060
2
17.0
2
88
5
52
45
0
5
48
1.26
50559--50594
14
2.6
14
100
0
72
41
8
0
50
1.33
52429--52479
18
2.9
17
85
5
75
37
0
7
54
1.29
55837--55901
25
2.6
25
78
9
78
29
23
18
29
1.98

Tables:   1

The End!