Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007447.1 Hibiscus syriacus cultivar Beakdansim tig00020355_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  105336

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1733--1771
20
2.1
19
85
9
53
30
20
23
25
1.98
1818--1878
20
2.9
21
85
7
79
44
18
16
21
1.87
11432--11472
21
2.0
21
90
0
64
12
29
36
21
1.90
14107--14166
21
2.7
23
72
10
63
18
23
35
23
1.96
17979--18019
21
2.0
21
85
9
57
36
9
2
51
1.48
19942--19979
20
1.9
19
89
5
58
13
18
44
23
1.85
24078--24152
31
2.4
31
88
0
105
56
16
8
20
1.65
25593--25632
21
1.9
21
85
10
55
42
7
12
37
1.71
25732--25787
26
2.1
27
83
3
69
46
0
3
50
1.19
30444--30483
21
1.9
21
94
0
71
7
25
42
25
1.80
30465--30515
23
2.3
23
83
6
70
19
23
41
15
1.90
35975--36030
22
2.6
21
91
8
94
19
23
37
19
1.94
39792--39846
23
2.4
23
81
0
65
14
18
16
50
1.77
40955--41015
16
3.9
16
86
4
63
40
0
4
54
1.22
40979--41015
2
18.5
2
100
0
74
48
0
0
51
1.00
43219--43245
2
13.5
2
100
0
54
51
0
0
48
1.00
43245--43281
19
1.9
19
88
0
56
43
0
10
45
1.39
51248--51287
20
2.0
20
90
0
62
25
15
30
30
1.95
59811--59984
90
1.9
89
92
1
294
45
6
10
37
1.65
61162--61200
17
2.3
17
86
8
53
20
0
5
74
1.01
61706--61746
21
2.0
21
90
0
64
43
9
2
43
1.50
75807--75864
21
2.8
21
97
0
107
34
8
6
50
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83115--83215
42
2.4
41
80
1
112
24
20
21
32
1.98
91652--91701
24
2.1
24
96
0
91
42
2
26
30
1.66

Tables:   1

The End!