Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000745.1 Hibiscus syriacus cultivar Beakdansim tig00001436_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71463

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1135--1177
18
2.4
18
84
7
52
23
9
2
65
1.34
13668--13921
122
2.1
122
95
1
465
44
9
8
38
1.67
16213--16248
2
18.0
2
88
0
54
50
0
0
50
1.00
31538--31572
17
2.0
18
88
5
54
2
34
20
42
1.66
33260--33342
29
2.8
29
92
1
139
43
9
14
32
1.78
36710--36739
15
2.0
15
93
0
51
20
0
23
56
1.42
38029--38111
29
2.8
29
92
1
139
43
9
14
32
1.78
43975--44018
23
1.9
23
85
0
61
31
4
2
61
1.28
49396--49468
18
3.9
18
71
7
74
27
28
21
21
1.99
51339--51379
17
2.4
18
80
12
50
17
24
0
58
1.38
53374--53592
4
54.5
4
99
0
429
49
25
0
25
1.50
53967--54028
18
3.3
18
72
16
54
33
30
12
22
1.92
53955--54029
38
2.0
38
86
0
105
30
29
17
22
1.97
54993--55030
2
19.0
2
100
0
76
50
0
0
50
1.00
65050--65715
233
2.9
230
82
2
751
34
16
15
33
1.90
65060--65741
232
2.9
232
81
4
728
33
17
15
33
1.91

Tables:   1

The End!