Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007451.1 Hibiscus syriacus cultivar Beakdansim tig00020402_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42819

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6936--7020
33
2.6
32
84
1
107
21
34
28
16
1.95
6800--7378
169
3.4
170
93
1
988
17
33
32
16
1.92
7105--7189
33
2.6
32
83
1
98
18
34
30
16
1.93
7273--7492
32
6.6
33
75
16
161
16
35
30
16
1.91
7230--7510
137
2.1
136
96
2
519
15
34
32
17
1.91
7230--7582
137
2.6
136
86
6
459
15
34
32
16
1.91
7878--7905
11
2.5
11
100
0
56
7
46
35
10
1.66
21476--21560
33
2.6
32
84
1
107
21
34
28
16
1.95
21339--21920
169
3.4
170
93
0
997
17
33
32
16
1.92
21645--21729
33
2.6
33
86
1
109
18
35
30
15
1.92
21814--22036
32
6.6
33
76
13
195
16
36
30
16
1.91
21784--21999
65
3.2
65
72
16
231
14
37
30
17
1.90
21771--22055
138
2.1
138
98
0
552
15
35
32
17
1.91
21339--22036
339
2.1
339
88
4
1018
17
34
31
16
1.92
22426--22457
11
2.9
11
100
0
64
9
43
37
9
1.69
30345--30915
166
3.5
164
90
5
875
17
33
32
16
1.92
30647--30730
33
2.6
32
83
5
96
19
35
29
15
1.92
30812--31028
32
6.6
32
74
17
135
17
37
29
15
1.90
30812--30892
30
2.7
30
88
5
110
19
38
27
14
1.91
39361--39440
32
2.5
32
85
4
99
20
35
27
17
1.95
39225--39796
166
3.4
166
91
3
904
17
34
31
16
1.93
39690--39908
32
6.6
33
70
18
134
16
36
29
16
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39665--39927
134
1.9
138
93
4
464
15
36
30
17
1.91

Tables:   1

The End!