Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007452.1 Hibiscus syriacus cultivar Beakdansim tig00020406_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  120950

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1816--1853
8
4.8
8
96
0
67
57
13
28
0
1.36
18485--18544
29
2.1
29
87
0
84
40
13
25
21
1.89
18737--18793
27
2.1
27
83
0
69
29
1
10
57
1.42
22495--22545
20
2.6
20
84
3
68
33
15
7
43
1.76
26227--26284
2
29.0
2
100
0
116
50
0
0
50
1.00
26743--26888
47
3.1
46
74
6
132
28
13
4
54
1.56
26744--26892
48
3.1
47
78
3
165
28
13
4
54
1.57
28822--28852
15
2.0
16
93
6
55
38
19
6
35
1.77
29820--29976
45
3.5
44
91
2
226
30
22
7
39
1.82
29799--29976
45
4.0
44
86
7
225
30
21
6
40
1.79
30058--30141
40
2.1
40
86
0
114
26
23
23
26
2.00
36836--36883
25
2.0
25
87
4
71
60
10
0
29
1.30
36825--37010
68
2.6
71
82
11
204
56
11
0
31
1.39
43744--43969
76
3.1
72
82
8
267
55
11
0
32
1.38
43826--43873
25
2.0
24
83
4
60
60
14
0
25
1.34
46442--46481
21
1.9
21
89
0
62
65
2
2
30
1.19
56815--56875
24
2.6
23
92
5
95
29
21
14
34
1.93
59642--59683
21
2.0
21
90
0
66
66
2
2
28
1.16
59703--59778
18
4.4
17
76
5
71
40
5
17
36
1.72
59703--59778
17
4.4
17
77
8
73
40
5
17
36
1.72
59703--59778
35
2.2
35
83
4
91
40
5
17
36
1.72
63777--64355
55
10.6
55
87
2
765
27
23
15
33
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64365--64753
54
7.3
54
82
3
430
24
23
16
34
1.95
64388--64753
106
3.4
108
83
5
422
23
23
17
35
1.95
65121--65226
37
2.9
36
84
1
131
23
17
22
35
1.95
66426--66541
8
13.8
8
75
21
87
9
16
0
74
1.07
66426--66556
51
2.6
50
84
8
151
9
16
0
73
1.13
66490--66538
10
5.3
10
85
7
52
8
14
0
77
0.98
68752--68797
8
5.4
8
80
14
56
0
13
0
86
0.56
68752--68799
9
5.4
9
83
11
64
0
14
0
85
0.60
72112--72253
55
2.6
55
84
2
178
21
23
14
40
1.90
72542--72675
47
2.9
45
79
12
130
34
19
12
33
1.90
72564--72679
47
2.5
46
91
1
178
31
22
13
31
1.93
87756--87817
27
2.3
27
88
0
97
35
11
16
37
1.84
88670--88746
31
2.4
32
82
2
93
28
28
27
15
1.96
110812--110851
14
2.9
14
88
7
55
5
25
2
67
1.23
119005--119064
23
2.5
24
86
2
95
50
11
15
23
1.76

Tables:   1

The End!