Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007453.1 Hibiscus syriacus cultivar Beakdansim tig00020409_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90273

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13--46
12
2.8
12
90
4
50
70
2
2
23
1.15
1037--2208
100
11.3
101
90
4
1634
22
18
26
33
1.97
1037--2208
205
5.7
207
91
3
1690
22
18
26
33
1.97
1037--2208
305
3.8
310
91
3
1772
22
18
26
33
1.97
2812--2967
68
2.4
63
83
8
188
37
9
21
31
1.86
2812--3194
63
5.8
64
68
13
197
38
11
20
29
1.87
2943--3248
36
8.9
36
69
16
139
38
13
20
27
1.90
4106--4156
22
2.3
22
96
0
93
25
11
27
35
1.91
4762--4810
20
2.4
21
82
6
64
2
14
6
77
1.05
4781--4831
10
4.8
10
76
21
50
0
13
5
80
0.89
4771--4831
22
2.7
22
82
7
79
0
13
6
80
0.90
7049--7082
9
3.8
9
88
11
52
76
0
2
20
0.92
7048--7082
13
2.6
13
90
4
52
77
0
2
20
0.90
7133--7161
2
14.5
2
100
0
58
51
0
0
48
1.00
7556--7598
2
21.5
2
100
0
86
51
0
0
48
1.00
7568--7626
18
3.1
18
85
9
64
61
0
0
38
0.96
8690--8733
23
2.0
21
86
8
61
75
0
0
25
0.81
9724--10034
43
7.3
43
79
5
263
28
20
22
27
1.99
9750--10034
86
3.3
86
86
4
344
27
20
23
29
1.99
9743--10034
128
2.3
129
81
3
338
27
20
22
29
1.99
9981--10075
43
2.2
43
81
7
104
34
21
18
25
1.96
10935--11087
75
2.0
76
97
1
290
49
11
11
27
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22238--22395
79
2.0
80
96
1
291
33
10
9
46
1.71
23001--23045
20
2.2
21
92
4
74
55
0
6
37
1.26
32474--32516
6
7.2
6
100
0
86
0
32
0
67
0.91
32829--32867
21
1.9
20
84
5
51
53
2
30
12
1.52
51792--51850
31
1.9
31
89
0
91
50
10
11
27
1.71
53100--53209
57
1.9
58
86
1
159
39
10
10
40
1.72
56638--56721
35
2.6
31
70
26
75
45
4
1
48
1.31
60891--60931
20
2.0
20
95
0
73
43
9
29
17
1.80
60967--61007
20
2.0
20
90
9
66
43
9
26
19
1.82
60882--61034
76
2.0
76
98
0
297
31
14
21
32
1.93
63469--63528
22
2.7
23
82
7
63
40
13
15
31
1.85
63476--63564
21
4.2
21
68
21
60
40
10
14
34
1.80
67052--67128
21
3.6
21
79
10
75
37
15
15
31
1.89
70239--72275
678
3.0
678
94
0
3491
26
24
18
29
1.98
80397--80451
3
18.3
3
77
7
58
3
30
1
63
1.22
82705--82837
66
2.0
66
100
0
266
36
19
10
33
1.86

Tables:   1

The End!