Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000746.1 Hibiscus syriacus cultivar Beakdansim tig00001437_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54922

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6107--6191
24
3.7
24
85
6
122
36
20
16
27
1.93
10750--10833
24
3.5
24
83
3
116
36
19
15
28
1.92
18063--18128
29
2.3
29
84
5
89
40
12
10
36
1.77
21853--21904
21
2.5
21
78
12
61
46
7
3
42
1.51
22378--22417
18
2.2
18
95
0
71
25
5
22
47
1.71
22694--22730
15
2.3
17
90
9
60
45
0
0
54
1.00
26544--26568
2
12.5
2
100
0
50
52
0
0
48
1.00
28792--28901
34
3.2
34
98
0
211
25
19
17
38
1.93
29165--29290
24
5.2
24
73
10
105
44
19
15
21
1.86
29148--29280
70
1.9
70
95
0
239
43
18
14
23
1.87
33949--33973
2
12.5
2
100
0
50
48
0
0
52
1.00
35735--35807
36
2.0
36
97
0
137
42
8
20
28
1.81
37615--37678
12
5.3
12
75
7
67
14
14
17
54
1.71
37611--37678
24
2.8
24
81
0
91
16
13
17
52
1.74
45355--45428
37
2.0
37
94
0
130
39
9
9
41
1.70
50818--50945
60
2.1
59
83
8
152
32
14
19
33
1.91

Tables:   1

The End!