Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007461.1 Hibiscus syriacus cultivar Beakdansim tig00020466_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  102653

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2068--2273
65
3.2
65
89
1
306
33
14
20
31
1.92
2436--2688
65
3.9
65
88
2
366
31
22
14
31
1.94
2442--2686
128
1.9
130
88
1
377
32
23
14
30
1.94
3763--3807
19
2.4
19
92
0
72
31
15
31
22
1.95
4281--4338
24
2.5
21
75
25
55
39
5
22
32
1.76
4532--4602
18
3.9
18
68
14
56
22
19
26
30
1.98
5710--5762
25
2.1
25
89
0
79
33
5
9
50
1.58
10423--10473
20
2.5
20
90
3
75
21
15
9
52
1.71
10439--10478
20
2.0
20
95
0
71
22
20
7
50
1.73
13197--13234
19
2.0
20
94
5
69
18
0
5
76
0.97
13832--13895
2
32.0
2
100
0
128
50
0
0
50
1.00
13998--14047
21
2.4
22
80
12
61
58
8
2
32
1.39
18412--18519
58
1.9
56
83
9
141
35
10
12
42
1.76
21801--21829
15
1.9
15
100
0
58
48
17
13
20
1.81
23637--23664
6
4.7
6
100
0
56
35
17
32
14
1.90
25157--25280
3
40.7
3
86
3
176
36
0
0
62
1.07
26596--26641
20
2.3
21
75
14
53
26
2
8
63
1.35
26685--26718
15
2.1
16
89
10
52
44
0
0
55
0.99
27372--27413
18
2.4
17
88
11
59
28
0
2
69
1.01
38000--38057
8
7.4
8
74
16
50
84
0
10
5
0.77
38387--38428
19
2.2
20
91
4
68
30
4
11
52
1.59
38984--39404
52
8.1
52
95
3
735
24
14
23
36
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38984--39404
103
4.1
104
96
1
751
24
14
23
36
1.93
38984--39404
155
2.7
155
94
3
749
24
14
23
36
1.93
40022--40811
113
7.0
113
96
0
1339
36
14
20
28
1.92
41104--41222
3
39.7
3
86
3
168
36
0
0
61
1.08
42528--42574
20
2.3
21
78
10
62
25
2
8
63
1.34
42621--42654
15
2.1
16
89
10
52
44
0
0
55
0.99
44432--44487
16
3.4
16
83
13
69
39
7
26
26
1.82
46292--46355
3
22.0
3
93
6
114
67
0
0
32
0.91
49400--49448
3
16.3
3
95
0
89
32
2
0
65
1.04
50822--50851
9
3.3
9
100
0
60
23
56
20
0
1.42
59660--59710
14
3.4
14
71
23
50
29
0
7
62
1.23
62768--62799
3
10.7
3
100
0
64
34
0
65
0
0.93
69234--69313
30
2.7
30
82
5
81
22
18
21
37
1.94
70763--70837
35
2.1
36
95
2
134
34
17
13
34
1.89
75811--75859
21
2.4
21
96
3
91
61
8
10
20
1.53
77894--77945
20
2.6
20
96
0
95
9
19
23
48
1.78
86971--87046
25
3.0
26
83
11
86
42
10
0
47
1.38
91449--91486
19
2.2
18
86
13
53
44
2
5
47
1.39
95452--95529
31
2.5
32
81
10
83
24
16
12
46
1.82
95520--95615
31
3.1
31
76
5
95
33
21
10
34
1.88
99483--99792
101
3.1
103
90
5
480
26
12
24
36
1.91
99799--99918
47
2.6
47
94
1
206
23
22
23
30
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
99799--99923
23
5.3
23
76
2
124
24
21
23
31
1.98

Tables:   1

The End!