Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007465.1 Hibiscus syriacus cultivar Beakdansim tig00020481_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65127

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4017--4049
10
3.7
9
88
11
50
30
0
0
69
0.88
4680--4719
21
1.9
20
90
10
62
80
0
15
5
0.88
4881--4923
22
2.0
22
86
9
61
13
9
11
65
1.48
5325--5361
20
1.9
20
88
5
58
43
0
0
56
0.99
7338--7381
15
2.8
15
89
6
61
38
0
18
43
1.50
7358--7409
15
3.5
15
86
0
68
38
5
21
34
1.77
7540--7585
24
1.9
24
95
0
83
19
28
26
26
1.99
7588--7641
24
2.2
24
86
0
81
24
20
22
33
1.97
16607--16698
4
22.0
4
73
22
66
72
2
2
22
1.06
16621--16738
45
2.6
45
76
18
104
69
1
3
25
1.13
16607--16721
49
2.3
51
80
10
121
71
1
3
23
1.11
16780--16845
17
3.8
18
82
13
77
59
6
1
33
1.31
17940--17973
16
2.2
16
89
5
52
76
0
0
23
0.79
18479--19256
105
7.4
105
93
0
1277
23
17
25
33
1.97
30510--30580
19
3.8
20
76
14
71
66
0
5
28
1.14
31773--31810
15
2.4
16
87
12
53
76
0
2
21
0.91
32650--32721
23
3.3
22
69
11
67
29
4
4
62
1.32
32586--32744
43
3.8
41
76
12
153
29
5
2
62
1.31
32780--33019
42
5.3
43
70
19
134
27
18
5
48
1.70
32686--32957
95
2.9
91
81
7
269
27
15
4
52
1.62
32727--32957
96
2.4
93
80
7
225
28
17
4
49
1.66
32880--33067
44
4.4
43
77
11
179
28
16
8
46
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32881--33074
86
2.3
86
80
7
214
28
17
8
45
1.77
42826--42882
18
3.0
18
78
12
60
49
8
14
28
1.72
42837--42882
18
2.3
21
85
10
62
45
8
13
32
1.73
50726--50939
96
2.2
97
85
6
276
24
19
5
51
1.67
50874--50975
54
1.9
54
85
2
143
22
22
6
48
1.74
50921--51111
44
4.4
44
76
9
151
28
17
6
47
1.73
50726--50998
96
2.8
97
82
9
249
24
19
6
50
1.70
50952--51135
44
4.2
43
73
11
151
28
17
7
46
1.75
54173--54221
20
2.5
20
80
9
55
63
0
8
28
1.23
54296--54351
28
2.0
27
86
3
76
66
1
7
25
1.27
55604--55807
83
2.5
83
84
0
266
27
21
17
33
1.96
55655--56416
243
3.1
241
86
3
985
25
19
22
33
1.97
55614--56412
323
2.5
322
84
3
978
25
19
21
33
1.97
55655--56416
80
9.4
80
84
3
891
25
19
22
33
1.97
57619--57822
98
2.1
98
98
0
390
32
19
16
31
1.94
62561--62614
2
27.0
2
92
0
90
48
3
0
48
1.19
63449--63671
64
3.5
63
81
8
224
32
20
19
27
1.97
64405--64631
102
2.2
103
98
0
438
25
13
24
37
1.92
64637--64699
23
2.7
23
92
0
99
19
28
26
25
1.98

Tables:   1

The End!