Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007469.1 Hibiscus syriacus cultivar Beakdansim tig00020516_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73070

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23--63
21
2.0
21
90
0
64
43
2
7
46
1.44
90--116
14
1.9
14
100
0
54
44
3
7
44
1.49
72--143
38
1.9
37
82
2
90
44
4
5
45
1.46
266--335
23
3.1
21
75
18
68
41
5
5
47
1.51
320--352
17
1.9
17
93
0
57
36
6
12
45
1.66
2635--2754
42
2.8
40
76
12
107
46
11
0
41
1.40
2626--2754
44
3.0
43
77
10
129
47
11
0
41
1.40
2650--2782
41
3.2
40
76
11
99
47
10
0
41
1.43
3284--3387
29
3.6
29
89
5
156
23
30
28
17
1.97
6808--6873
32
2.1
32
88
5
98
37
34
10
16
1.83
6779--6875
48
2.0
47
82
2
113
40
30
10
18
1.84
12506--12549
19
2.3
19
100
0
88
40
11
34
13
1.81
24042--24087
20
2.3
19
85
14
58
26
15
8
50
1.73
25973--26035
2
31.5
2
90
0
99
3
1
46
49
1.27
26223--26321
46
2.2
45
81
7
110
35
20
22
22
1.96
26393--26504
45
2.5
45
83
1
136
34
23
9
32
1.87
26424--26540
45
2.6
45
86
0
144
35
23
9
32
1.87
37668--37713
24
1.9
24
86
0
65
34
26
23
15
1.94
37683--37782
23
4.3
22
78
6
67
37
24
19
20
1.94
37908--38007
45
2.2
45
81
10
123
33
23
8
36
1.84
50145--50576
54
7.8
56
78
8
264
31
18
23
26
1.98
50229--50379
28
5.4
29
65
17
86
31
18
21
28
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50140--50415
113
2.5
111
79
10
285
31
17
22
28
1.97
54662--54699
2
18.5
2
94
5
67
47
0
2
50
1.15

Tables:   1

The End!