Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007473.1 Hibiscus syriacus cultivar Beakdansim tig00020538_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67399

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1990--2037
19
2.7
18
81
9
53
54
4
12
29
1.56
1999--2037
19
2.1
19
90
0
60
53
5
10
30
1.56
2010--2078
26
2.6
26
77
6
68
57
10
2
28
1.46
2126--2531
213
1.9
209
85
5
557
43
16
11
27
1.83
2766--2833
35
1.9
36
87
3
102
35
13
10
41
1.78
3026--3074
21
2.4
21
82
3
64
55
0
24
20
1.44
3037--3080
21
2.1
21
82
0
52
52
4
22
20
1.65
3268--3317
23
2.2
23
92
0
82
38
8
26
28
1.84
10343--10402
21
2.9
21
76
18
70
26
10
21
41
1.85
10414--10522
21
5.1
21
92
1
164
21
15
29
33
1.94
20571--20623
17
3.1
17
80
0
61
41
5
13
39
1.68
20633--20716
36
2.4
36
80
7
93
45
14
10
29
1.78
22799--22851
28
2.0
26
88
7
79
13
1
7
77
1.06
29816--31265
699
2.1
696
87
3
2059
28
23
15
33
1.94
34153--34192
21
2.0
20
85
5
53
37
20
15
27
1.92
40612--40659
22
2.2
22
96
0
87
22
20
37
18
1.94
59242--59286
13
3.6
12
84
6
54
4
13
0
82
0.82
59242--59286
18
2.3
20
88
7
67
4
13
0
82
0.82
59252--59291
19
2.1
19
86
9
55
2
17
0
80
0.83
62617--62651
15
2.3
15
90
0
52
51
0
25
22
1.48

Tables:   1

The End!