Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007474.1 Hibiscus syriacus cultivar Beakdansim tig00020540_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55324

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1086--1127
21
2.0
22
90
4
68
64
0
7
28
1.20
1107--1334
29
8.0
29
67
18
97
56
1
4
37
1.31
1146--1204
23
2.5
22
75
20
57
62
1
0
35
1.05
2959--2994
9
3.9
9
96
3
63
80
0
0
19
0.71
7946--7975
15
2.0
15
100
0
60
53
6
0
40
1.27
9937--10040
3
34.7
3
90
0
163
35
2
0
61
1.11
10036--10075
11
3.7
11
86
3
55
57
2
0
40
1.12
11483--11520
13
2.9
13
81
11
51
42
0
0
57
0.98
12138--12247
28
3.9
28
72
12
73
28
5
2
63
1.30
14654--15899
114
10.9
113
95
1
1782
36
13
20
29
1.91
16216--16337
3
40.7
3
94
0
217
34
1
0
63
1.04
16333--16373
11
3.8
10
87
9
55
56
2
0
41
1.13
16469--16506
14
2.7
14
100
0
76
13
52
21
13
1.73
17205--17245
11
3.8
10
87
9
55
56
2
0
41
1.13
17918--17955
13
2.9
13
81
11
51
42
0
0
57
0.98
21899--21941
17
2.4
18
81
18
54
44
0
0
55
0.99
23288--23321
18
1.9
18
88
5
52
17
26
29
26
1.98
27293--27317
5
5.0
5
100
0
50
0
0
60
40
0.97
27360--27391
6
5.3
6
100
0
64
0
34
0
65
0.93
27423--27454
6
5.3
6
100
0
64
0
34
0
65
0.93
27354--27499
63
2.3
63
100
0
292
21
25
1
52
1.55
28594--28625
14
2.2
15
94
5
57
46
0
9
43
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30290--30503
117
1.8
116
89
3
340
42
6
9
41
1.63
37519--37591
2
39.0
2
80
13
75
53
1
0
45
1.09
37914--37941
14
2.0
14
100
0
56
64
0
0
35
0.94
37617--37982
118
3.2
117
89
5
543
51
3
3
42
1.35
39060--39109
22
2.3
22
86
6
66
44
2
0
54
1.11
39053--39110
28
2.0
29
83
3
73
43
3
0
53
1.17
44243--44384
68
2.1
68
91
1
230
34
0
10
54
1.40
45104--45176
38
1.9
38
83
10
96
23
10
0
65
1.24
45128--45176
19
2.5
20
77
9
57
20
8
0
71
1.11
49254--49302
23
2.1
23
88
0
71
42
14
18
24
1.87
50197--50379
69
2.5
74
86
9
261
30
0
12
56
1.40
50206--50313
25
4.6
23
67
18
71
31
0
12
55
1.38
51085--51127
15
2.8
16
83
13
54
16
4
0
79
0.90
51083--51126
16
2.6
18
79
20
58
18
4
0
77
0.94
54447--54479
17
1.9
17
88
11
50
33
3
0
63
1.10

Tables:   1

The End!