Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007479.1 Hibiscus syriacus cultivar Beakdansim tig00020584_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65823

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3831--3866
18
2.0
18
94
0
63
16
8
33
41
1.78
4600--4671
37
1.9
37
82
0
90
26
22
12
38
1.89
5291--6115
106
7.8
106
89
1
1219
36
23
17
22
1.95
7455--7493
2
19.5
2
100
0
78
48
0
0
51
1.00
14044--14080
2
18.5
2
100
0
74
51
0
0
48
1.00
19126--19197
34
2.2
32
85
7
90
31
15
30
22
1.94
22491--22560
34
2.1
32
86
5
95
31
15
30
22
1.95
25943--25984
2
22.0
2
90
9
70
52
0
0
47
1.00
27856--28190
49
6.8
49
87
0
463
39
14
20
26
1.90
34809--35150
49
7.0
49
88
1
481
38
14
21
26
1.91
39647--39741
50
1.9
50
88
0
145
41
3
4
51
1.37
39841--39895
25
2.2
25
83
3
65
29
16
5
49
1.68
40169--40202
16
2.1
16
94
0
59
61
0
0
38
0.96
42824--42859
15
2.3
16
90
4
56
36
2
0
61
1.11
44910--44954
3
15.0
3
81
9
56
35
2
31
31
1.70
45113--45182
26
2.7
26
76
8
72
17
2
8
71
1.23
47447--47563
60
2.0
60
81
3
137
26
21
23
28
1.99
49660--49747
45
1.9
46
90
2
142
28
18
23
29
1.98
65549--65596
25
1.9
25
91
0
78
43
18
22
14
1.87

Tables:   1

The End!