Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007487.1 Hibiscus syriacus cultivar Beakdansim tig00020667_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70219

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1216--1242
14
1.9
14
100
0
54
29
29
22
18
1.97
17172--17228
22
2.6
22
97
0
105
38
17
14
29
1.89
17906--18496
68
8.7
68
85
0
741
32
14
23
29
1.94
18456--18878
81
5.2
81
86
1
535
35
10
24
30
1.89
18457--18860
162
2.5
162
90
1
596
35
10
24
29
1.88
23405--23520
55
2.1
55
82
9
137
31
12
20
34
1.91
23770--24363
68
8.7
68
86
0
803
31
14
23
29
1.95
24313--24752
81
5.4
81
85
3
562
35
12
24
27
1.91
24343--24743
163
2.5
161
85
3
554
36
11
23
28
1.90
32869--32913
18
2.5
18
96
0
81
33
0
11
55
1.35
33335--33427
47
2.0
47
93
4
161
17
27
18
36
1.93
44754--44866
49
2.2
50
92
4
183
52
11
19
16
1.74
46018--46165
75
2.0
71
90
5
233
20
18
20
39
1.92
52685--52742
24
2.4
24
97
2
107
18
22
25
32
1.97
52856--52926
24
3.0
24
83
2
90
19
23
25
30
1.98
53205--53243
18
2.2
17
86
4
51
53
2
15
28
1.55
55433--55485
22
2.4
22
100
0
106
15
24
43
16
1.87
62062--62086
6
4.2
6
100
0
50
16
32
16
36
1.90
67586--67670
23
3.7
23
89
6
127
20
21
25
32
1.97

Tables:   1

The End!