Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007500.1 Hibiscus syriacus cultivar Beakdansim tig00020793_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81517

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
986--1034
16
2.9
16
84
6
53
61
0
22
16
1.34
8618--8652
6
5.7
6
86
6
52
0
14
2
82
0.77
8618--8652
13
2.8
12
87
8
52
0
14
2
82
0.77
9410--9453
22
2.0
21
82
4
52
29
2
29
38
1.69
9804--9850
19
2.5
19
89
6
69
42
6
14
36
1.72
14354--14382
15
2.0
15
93
6
51
75
3
20
0
0.94
17098--17123
13
2.0
13
100
0
52
38
0
30
30
1.58
18733--18757
11
2.3
11
100
0
50
16
8
44
32
1.76
20388--20441
23
2.3
25
75
12
60
5
16
3
74
1.16
20761--20804
22
2.0
21
86
4
61
25
2
34
38
1.68
21157--21207
19
2.6
20
90
3
77
43
5
15
35
1.71
22105--22164
30
2.0
31
83
3
77
51
10
8
30
1.64
25919--25955
5
7.6
5
87
6
58
78
2
18
0
0.87
25916--25955
19
2.2
18
90
4
62
80
2
17
0
0.83
25919--25958
14
2.8
14
92
3
62
77
2
20
0
0.88
36383--36436
23
2.2
24
83
6
65
59
14
14
11
1.62
41322--41386
20
3.3
20
78
6
80
0
9
10
80
0.92
41315--41375
28
2.1
28
84
3
77
0
11
11
77
1.01
44557--44591
6
5.7
6
86
6
52
2
14
0
82
0.77
44557--44591
13
2.8
12
87
8
52
2
14
0
82
0.77
49224--49264
15
2.6
16
78
21
50
53
0
29
17
1.44
55408--55797
192
2.0
192
93
1
665
40
13
14
32
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56606--56644
15
2.5
15
83
4
51
56
0
25
17
1.41
56702--56785
35
2.4
36
82
9
102
35
2
30
30
1.71
56722--56817
35
2.7
36
85
1
122
35
2
33
29
1.69
57086--57117
16
2.0
16
100
0
64
31
18
6
43
1.75
60390--60503
35
3.2
35
88
3
158
30
3
36
28
1.74
66535--66578
20
2.2
20
84
8
54
63
0
15
20
1.31
68975--69016
15
2.7
15
92
7
66
59
0
28
11
1.33
69211--69268
13
4.7
13
68
12
50
29
1
41
27
1.66
69163--69269
35
3.0
35
87
1
160
31
3
37
27
1.74
71025--71129
36
2.9
35
92
1
165
27
5
37
29
1.80
73141--73191
23
2.2
23
85
0
66
21
25
17
35
1.95
74897--74994
36
2.7
35
90
1
142
28
5
34
31
1.79
80037--80084
11
4.6
10
80
16
53
0
20
0
79
0.74
80039--80076
6
6.7
6
90
3
53
0
18
0
81
0.69
80461--80554
34
2.7
35
91
3
154
27
4
37
30
1.76

Tables:   1

The End!