Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007501.1 Hibiscus syriacus cultivar Beakdansim tig00020796_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78722

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1933--1987
19
3.3
19
63
36
54
10
21
29
38
1.88
1933--2000
30
2.3
30
97
0
127
11
20
29
38
1.88
4605--4637
14
2.3
15
89
5
50
21
21
0
57
1.41
19592--19634
23
1.9
23
85
4
61
16
9
4
69
1.31
30964--31006
23
1.9
23
85
4
61
16
9
4
69
1.31
32075--32115
22
1.9
21
85
5
55
70
2
14
12
1.26
33543--33612
18
4.0
18
71
23
60
1
18
4
75
1.04
37534--37574
21
2.0
21
85
9
57
0
19
2
78
0.87
37958--38033
35
2.2
35
95
0
134
34
1
36
27
1.66
38012--38083
13
5.7
13
73
6
67
30
1
41
26
1.64
37977--38093
48
2.4
50
86
4
166
34
2
37
25
1.70
37977--38101
50
2.6
48
83
7
155
34
2
35
28
1.70
41183--42321
149
7.9
147
87
6
1310
20
34
21
23
1.97
41190--42321
435
2.6
423
84
7
1319
20
34
21
23
1.96
50707--50745
20
1.9
20
89
5
60
33
7
30
28
1.85
51970--51999
13
2.4
13
94
5
53
26
30
0
43
1.55
65423--65478
23
2.3
25
81
9
80
64
12
14
8
1.50
65465--65505
10
4.0
10
93
6
73
80
0
19
0
0.71
65465--65505
21
2.0
21
95
4
75
80
0
19
0
0.71
66918--67022
36
2.9
36
90
1
158
30
36
4
28
1.78
72538--72583
23
2.0
24
86
4
67
65
13
13
8
1.48
75300--75329
13
2.4
13
94
5
53
43
0
30
26
1.55

Tables:   1

The End!