Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007503.1 Hibiscus syriacus cultivar Beakdansim tig00020806_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69742

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2928--2956
15
2.0
15
93
6
51
0
20
3
75
0.94
7464--7514
20
2.6
20
90
3
77
35
15
5
43
1.71
7867--7910
22
2.0
21
82
4
52
38
29
2
29
1.69
8435--8471
15
2.5
15
95
0
65
8
29
0
62
1.24
8435--8513
15
5.4
14
72
17
54
13
25
0
60
1.33
8687--8721
6
5.7
6
86
6
52
82
2
14
0
0.77
8684--8721
12
3.1
12
85
7
58
81
5
13
0
0.85
10581--10609
15
2.0
15
93
6
51
75
3
20
0
0.94
16380--16428
16
2.9
16
84
6
53
16
22
0
61
1.34
29472--29510
19
2.1
19
90
0
60
33
10
28
28
1.90
31301--31369
22
3.0
22
72
27
63
18
17
0
63
1.31
31303--31379
23
3.2
24
73
26
74
18
16
0
64
1.28
31929--31971
23
1.9
21
81
13
50
32
18
13
34
1.90
33500--33584
11
7.2
11
72
22
66
31
36
3
28
1.74
33498--33598
36
2.8
36
93
1
168
32
36
3
26
1.75
33498--33614
36
3.4
34
85
11
130
30
36
3
29
1.74
33498--33637
36
4.1
33
84
9
88
30
36
2
30
1.72
33977--34023
25
2.0
24
84
16
62
74
8
17
0
1.05
37907--37991
11
7.2
11
72
22
66
31
36
3
28
1.74
37905--38005
36
2.8
36
93
1
168
32
36
3
26
1.75
37905--38021
36
3.4
34
85
11
130
30
36
3
29
1.74
37905--38044
36
4.1
33
84
9
88
30
36
2
30
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40129--40191
1
63.0
1
80
0
72
0
0
9
90
0.45
40129--40191
11
5.7
11
85
10
85
0
0
9
90
0.45
40129--40191
25
2.7
23
85
9
92
0
0
9
90
0.45
40131--40190
20
2.9
19
88
11
84
0
0
10
90
0.47
45376--45416
19
2.0
21
86
9
59
65
0
14
19
1.26
51155--51208
21
2.8
19
81
13
58
1
18
3
75
1.03
51160--51208
18
2.8
16
82
14
53
2
18
4
75
1.06
51894--51936
19
2.2
20
87
4
61
48
6
9
34
1.62
53181--53232
23
2.3
23
100
0
104
28
17
21
32
1.96
65878--65938
23
2.7
22
73
26
56
19
16
0
63
1.30
68870--68901
16
2.0
16
100
0
64
31
18
6
43
1.75

Tables:   1

The End!