Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007505.1 Hibiscus syriacus cultivar Beakdansim tig00020814_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63522

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3924--4042
63
1.9
63
96
0
220
33
21
31
13
1.92
8763--9148
182
2.1
184
90
2
600
43
2
8
46
1.48
10328--10389
12
5.2
11
76
19
54
22
0
4
72
1.03
10319--10408
37
2.5
37
82
10
98
27
0
7
64
1.21
11346--11412
33
2.0
33
97
0
125
40
14
17
26
1.89
11501--11591
31
3.0
30
80
12
107
37
7
7
47
1.61
11521--11617
28
3.3
29
76
13
108
39
8
8
44
1.64
17184--17238
19
3.0
18
81
7
58
65
0
0
34
0.93
24644--24691
23
2.1
23
88
0
69
35
12
18
33
1.89
25418--25454
18
2.1
18
89
0
56
51
10
5
32
1.60
25658--25722
23
2.8
23
90
0
94
38
18
7
35
1.80
26073--26126
23
2.5
20
75
18
54
42
18
1
37
1.61
26088--26150
23
2.7
23
90
0
90
38
19
6
36
1.77
28701--29732
367
2.8
365
96
1
1898
34
16
15
34
1.90
28701--29732
184
5.7
184
98
0
1904
34
16
15
34
1.90
31677--33092
199
7.1
200
96
2
2533
32
15
15
37
1.88
33171--33215
19
2.4
19
92
0
72
57
8
2
31
1.41
35001--35064
32
2.0
32
87
0
92
25
43
1
29
1.64
37190--37236
23
2.0
23
84
8
60
27
8
14
48
1.73
37541--37586
20
2.3
20
89
10
76
17
17
10
54
1.70
39245--39302
29
2.0
28
86
3
80
34
13
3
48
1.60
43656--43698
2
21.5
2
95
0
77
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43904--43931
2
14.0
2
100
0
56
50
0
0
50
1.00
46542--46595
22
2.5
21
79
8
54
50
5
1
42
1.36
46957--47012
14
4.1
14
76
17
55
44
0
1
53
1.11
55143--55175
16
2.1
16
100
0
66
30
18
27
24
1.98

Tables:   1

The End!