Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007506.1 Hibiscus syriacus cultivar Beakdansim tig00020821_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60503

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17731--17779
23
2.1
23
84
0
62
28
14
34
22
1.93
21288--21334
13
3.6
13
88
0
67
19
44
17
19
1.87
21318--21352
18
1.9
18
94
0
61
20
42
22
14
1.88
21335--21382
8
6.5
8
77
18
59
14
35
25
25
1.94
21287--21359
13
5.2
13
75
15
65
17
42
20
19
1.89
21352--21388
15
2.5
15
90
0
56
13
27
27
32
1.94
29851--29914
20
3.2
20
84
8
94
29
23
17
29
1.97
29881--29927
20
2.3
20
85
0
58
36
27
8
27
1.86
38714--38758
22
2.0
21
87
8
63
48
11
6
33
1.65
38722--38763
22
2.0
21
86
13
61
42
9
9
38
1.70
43480--43594
44
2.6
43
81
9
133
33
21
20
25
1.97
47526--47575
22
2.3
22
92
0
82
16
28
30
26
1.96
48076--48106
13
2.4
13
100
0
62
51
16
6
25
1.68
49303--49334
15
2.1
15
100
0
64
28
25
18
28
1.98
49950--50017
2
34.0
2
100
0
136
50
0
0
50
1.00
50316--50484
44
3.8
42
77
12
135
31
21
24
21
1.98
50362--50492
44
3.0
43
81
8
140
32
22
22
22
1.98
52444--52484
17
2.3
19
87
8
59
53
7
0
39
1.29
57221--57305
24
3.3
24
78
18
84
41
2
1
55
1.20
58420--58496
4
18.8
4
84
5
100
46
20
3
28
1.68
60305--60336
16
2.1
16
88
11
50
34
25
6
34
1.81

Tables:   1

The End!