Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007512.1 Hibiscus syriacus cultivar Beakdansim tig00020895_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90093

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2431--2461
15
2.1
15
93
0
53
32
12
3
51
1.56
6417--6455
12
3.2
12
100
0
78
48
0
15
35
1.45
24014--24054
21
1.9
21
85
5
55
46
9
2
41
1.50
27599--27650
20
2.6
20
93
0
86
53
1
17
26
1.54
29202--29255
26
2.2
25
83
9
67
48
1
3
46
1.30
29724--29752
2
14.5
2
100
0
58
51
0
0
48
1.00
33648--33705
20
2.7
20
86
10
71
27
22
18
31
1.97
33693--33854
64
2.5
63
79
9
184
24
24
17
33
1.97
35180--35245
34
1.9
35
87
3
98
24
16
33
25
1.96
35547--35605
20
2.9
21
90
7
95
49
11
8
30
1.69
38727--38793
34
2.0
34
85
5
91
25
20
32
20
1.97
38762--38811
19
2.5
20
90
3
75
22
16
38
24
1.93
42057--42102
7
6.3
7
82
9
56
41
4
0
54
1.20
42069--42123
22
2.5
22
85
11
69
43
5
1
49
1.36
43448--43527
31
2.6
31
79
16
87
40
1
5
53
1.31
44248--44328
20
4.0
20
76
20
71
51
3
0
44
1.19
44247--44328
31
2.7
29
80
16
94
52
3
0
43
1.18
44247--44297
21
2.5
21
81
12
63
54
1
0
43
1.11
44321--44362
20
2.0
21
86
13
61
40
9
0
50
1.35
47465--47492
13
2.2
13
100
0
56
39
14
32
14
1.86
48523--48831
152
2.0
152
98
1
595
26
12
29
31
1.93
65673--65739
22
3.0
22
100
0
134
26
26
26
19
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65959--66018
30
2.0
31
90
3
95
33
23
6
36
1.81
66034--66103
29
2.4
29
92
0
113
38
12
10
38
1.77
66407--66558
68
2.2
68
85
2
198
19
26
26
26
1.99
66538--66580
21
2.0
21
86
0
59
16
25
27
30
1.97
72606--72672
22
3.0
22
100
0
134
26
26
26
19
1.99
72892--72951
30
2.0
31
90
3
95
33
23
6
36
1.81
72967--73036
29
2.4
29
92
0
113
38
12
10
38
1.77
73340--73490
67
2.2
67
85
3
196
19
26
26
27
1.99
73470--73512
21
2.0
21
86
0
59
16
25
27
30
1.97
75843--75871
15
1.9
15
100
0
58
34
0
20
44
1.52
84210--84235
2
13.0
2
100
0
52
50
0
0
50
1.00
85758--86234
55
8.9
55
81
7
459
29
25
16
28
1.97
86012--86148
48
2.8
48
87
4
177
25
29
13
31
1.94
86237--86341
36
2.9
36
83
4
140
21
20
18
39
1.93
87600--87637
15
2.4
16
91
4
60
7
18
0
73
1.06
87601--87637
16
2.2
17
90
4
58
5
18
0
75
0.99
87674--87724
18
2.8
19
85
14
72
9
19
0
70
1.14
87596--87728
25
5.3
25
68
22
91
6
21
0
71
1.09

Tables:   1

The End!