Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007514.1 Hibiscus syriacus cultivar Beakdansim tig00020898_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57409

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
208--269
29
2.2
30
85
8
85
14
8
12
64
1.49
221--280
29
2.1
29
87
6
86
13
8
15
63
1.51
5405--5468
32
2.0
32
87
0
92
26
14
29
29
1.95
5772--5830
30
1.9
32
89
6
95
28
18
13
38
1.89
5929--6236
130
2.3
130
82
7
372
25
31
18
23
1.97
6446--6504
3
20.0
3
92
3
102
32
1
0
66
1.02
7340--7474
29
4.5
29
74
11
96
22
12
6
57
1.58
7340--7458
31
3.9
30
73
12
100
24
12
5
57
1.55
10436--10476
6
6.8
6
97
0
64
39
0
9
51
1.35
10759--10817
26
2.3
24
81
13
73
79
1
13
5
0.97
10735--10800
17
3.9
16
76
16
53
75
3
12
9
1.14
10719--10816
35
2.9
35
80
14
91
76
2
13
8
1.09
10717--10817
43
2.3
41
76
14
96
76
1
13
7
1.10
10770--10829
26
2.3
27
86
13
81
78
1
13
6
1.02
11505--11613
28
3.9
28
88
0
155
41
33
4
20
1.73
13042--13123
42
2.0
42
82
4
103
21
20
24
32
1.98
12884--13712
278
3.0
278
88
4
1179
29
15
20
34
1.94
13320--13451
42
3.2
41
79
5
140
26
21
21
31
1.98
13597--13710
42
2.7
41
82
9
117
27
19
22
30
1.98
15349--15422
31
2.5
29
76
10
71
20
8
8
63
1.47
15471--15513
17
2.7
15
82
13
50
20
2
4
72
1.14
22186--22211
9
2.9
9
100
0
52
69
0
11
19
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23543--23575
13
2.4
14
90
5
50
51
15
6
27
1.66
40068--40121
21
2.6
21
80
11
58
44
16
5
33
1.71
56362--56434
19
3.7
20
79
13
71
31
17
26
24
1.97
56382--56425
22
2.0
22
90
0
70
31
15
25
27
1.96

Tables:   1

The End!