Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007517.1 Hibiscus syriacus cultivar Beakdansim tig00020943_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77156

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2068--2217
75
2.0
75
86
0
210
40
13
18
27
1.88
3553--3600
17
2.9
17
84
6
64
45
12
0
41
1.42
7577--7609
16
2.0
17
88
5
50
18
18
12
51
1.76
9951--10142
65
3.0
64
80
11
205
26
18
22
32
1.97
17957--17981
2
12.5
2
100
0
50
48
0
52
0
1.00
28753--28935
92
2.0
94
83
6
239
37
8
12
40
1.74
42080--42118
2
19.5
2
100
0
78
51
0
0
48
1.00
48848--48901
21
2.6
21
93
0
90
27
20
22
29
1.98
51582--51614
3
11.0
3
100
0
66
33
0
0
66
0.92
60873--60911
2
19.5
2
100
0
78
51
0
0
48
1.00
62931--62989
31
1.9
31
82
6
75
25
10
18
45
1.81
68257--68281
5
5.0
5
100
0
50
0
0
80
20
0.72
75034--75089
27
2.3
25
77
19
64
28
33
8
28
1.87
75046--75097
27
1.9
27
96
0
95
26
34
9
28
1.88
75250--75391
36
3.9
36
96
1
250
47
15
5
30
1.68

Tables:   1

The End!