Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007525.1 Hibiscus syriacus cultivar Beakdansim tig00020981_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67581

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8010--8064
22
2.5
22
82
11
76
41
12
25
20
1.87
14815--15024
45
4.6
45
84
7
257
37
10
21
30
1.87
14819--14935
23
5.2
23
63
8
78
34
10
23
32
1.88
14805--15024
90
2.4
90
88
5
320
37
10
22
29
1.87
18279--18311
17
1.9
17
88
11
50
66
9
9
15
1.43
18952--19010
23
2.6
23
83
5
66
37
1
8
52
1.42
19229--19273
18
2.5
18
96
0
81
57
4
4
33
1.38
22214--22289
37
2.1
37
95
5
136
40
25
11
22
1.88
25508--25551
23
2.0
22
90
4
70
63
0
0
36
0.95
25534--25579
23
2.0
23
82
4
56
56
6
0
36
1.25
27185--27225
21
2.0
21
85
0
55
36
24
7
31
1.83
43141--43169
13
2.2
13
100
0
58
86
0
0
13
0.58
44079--44227
80
1.9
80
84
2
201
28
23
19
28
1.98
44185--44631
200
2.3
196
82
1
543
26
18
21
33
1.97
48419--48453
18
1.9
18
88
0
52
28
28
22
20
1.98
54722--54760
14
2.9
14
85
11
55
76
0
23
0
0.78
55350--55394
20
2.2
20
84
11
56
66
4
8
20
1.36
57051--57093
17
2.4
18
80
3
52
81
2
9
6
0.95
57121--57216
41
2.3
42
81
13
110
43
7
2
46
1.43
57176--57202
14
1.9
14
100
0
54
37
11
7
44
1.68
57212--57273
19
3.4
18
78
10
72
41
6
4
46
1.51
57245--57328
30
3.1
29
77
20
92
45
5
1
47
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57274--57357
22
4.0
22
78
7
86
47
4
0
47
1.23
57231--57328
52
1.9
50
87
8
144
44
6
1
47
1.34
60060--60163
45
2.3
43
83
6
127
31
22
9
36
1.86
65028--65232
102
2.0
102
90
3
324
28
25
18
27
1.98

Tables:   1

The End!