Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007529.1 Hibiscus syriacus cultivar Beakdansim tig00021014_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  141296

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18499--18540
15
2.8
15
88
0
57
28
0
50
21
1.49
19935--20111
44
4.0
45
90
2
277
30
20
7
41
1.80
19941--20111
89
1.9
89
92
2
290
29
20
7
42
1.80
20216--20377
40
4.1
40
97
0
306
32
25
17
24
1.96
21999--22046
23
2.1
23
100
0
96
29
25
8
37
1.85
26732--26771
2
20.0
2
100
0
80
50
0
0
50
1.00
28353--28400
21
2.3
22
79
17
57
66
4
8
20
1.35
30661--30703
23
1.9
22
90
4
68
4
13
2
79
1.00
36021--36065
21
2.2
21
96
4
83
66
0
17
15
1.25
40626--40667
21
2.0
21
90
0
66
30
19
19
30
1.96
41961--41998
16
2.4
16
82
13
51
71
7
2
18
1.23
44003--44051
23
2.1
23
85
7
64
28
2
12
57
1.46
52965--53039
2
37.5
2
100
0
150
50
0
0
49
1.00
73637--73679
5
8.6
5
85
10
52
76
0
4
18
0.95
79561--79620
3
19.7
3
82
3
75
36
1
0
61
1.06
81316--81583
140
1.9
141
83
8
350
37
8
8
44
1.67
87428--87538
17
6.6
16
71
21
59
72
0
20
6
1.05
87432--87558
7
16.6
7
69
20
60
73
0
21
5
1.03
87443--87539
17
5.8
17
70
19
71
73
0
19
7
1.06
91812--91891
22
3.6
22
89
0
115
32
13
12
41
1.82
92566--93602
73
14.2
73
96
0
1851
26
21
20
30
1.98
93742--93804
3
20.7
3
83
3
81
36
1
0
61
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
95476--95743
140
1.9
141
82
8
341
38
8
8
44
1.65
105886--105954
11
6.0
11
83
9
75
73
1
7
17
1.12
105886--105954
23
3.0
22
83
6
84
73
1
7
17
1.12
105886--105951
18
3.8
18
84
11
86
74
1
7
16
1.12
112827--112871
18
2.5
18
88
0
63
66
2
13
17
1.34
113504--113551
21
2.3
22
79
17
57
64
4
6
25
1.35
113645--113683
20
1.9
21
85
15
55
53
5
15
25
1.62
113880--113911
12
2.7
12
100
0
64
15
37
28
18
1.92
122571--122748
90
2.0
90
90
0
284
44
7
11
36
1.69
129072--129244
90
1.9
90
92
0
292
45
6
12
35
1.69
131182--131320
74
1.9
74
92
0
233
34
17
7
40
1.78
131182--131337
74
2.1
74
86
0
222
31
21
8
38
1.83
131708--131753
20
2.3
20
100
0
92
32
30
15
21
1.94
136826--136888
30
2.0
32
82
11
78
55
12
1
30
1.47
138975--139013
10
3.9
10
87
9
53
20
35
0
43
1.52

Tables:   1

The End!