Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007531.1 Hibiscus syriacus cultivar Beakdansim tig00021029_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78709

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1463--1510
21
2.2
20
82
17
53
22
18
0
58
1.39
1476--1516
21
2.0
21
85
9
57
24
21
0
53
1.46
3297--3328
2
16.0
2
100
0
64
50
0
0
50
1.00
3696--3765
21
3.2
21
79
4
68
52
1
5
40
1.34
3840--3976
60
2.3
60
78
7
136
35
16
14
34
1.89
7553--7630
39
2.1
36
84
13
97
51
7
14
26
1.69
9353--9388
17
2.2
17
90
5
56
36
2
5
55
1.38
14058--14211
57
2.7
58
87
2
213
26
21
15
36
1.93
20933--21047
60
1.9
60
82
7
144
46
3
16
33
1.64
24431--24510
33
2.4
33
80
0
88
20
18
23
37
1.94
26460--26601
74
1.9
74
94
0
248
38
16
11
33
1.85
31439--31477
20
2.0
20
84
0
51
38
30
17
12
1.88
41593--41648
28
2.0
28
96
0
103
23
28
12
35
1.91
46614--46647
17
2.0
17
100
0
68
58
17
11
11
1.62
51218--51319
31
3.4
30
72
15
93
33
18
6
41
1.77
51219--51401
60
3.0
60
82
3
217
34
19
5
40
1.74
51946--51978
14
2.4
14
90
10
50
33
21
6
39
1.78
52054--52120
23
3.0
22
80
6
71
26
20
28
23
1.99
52225--52264
2
20.0
2
100
0
80
50
0
0
50
1.00
52359--52427
30
2.3
30
94
0
120
33
21
4
40
1.73
54100--54449
174
2.0
174
98
0
682
36
16
15
32
1.90
57996--58368
182
2.0
184
91
1
606
44
8
3
43
1.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58336--58373
19
2.0
20
89
5
60
36
5
2
55
1.37
58739--58890
60
2.5
60
83
6
166
40
4
23
32
1.75
59177--59219
20
2.3
18
84
8
50
41
6
11
39
1.68
76048--76102
6
9.7
6
96
3
89
0
18
52
29
1.45
76264--76324
20
3.0
20
69
11
61
34
26
18
21
1.96

Tables:   1

The End!