Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007532.1 Hibiscus syriacus cultivar Beakdansim tig00021039_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23739

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10706--10734
15
1.9
15
100
0
58
31
34
13
20
1.92
11705--11733
14
2.1
14
100
0
58
37
0
6
55
1.27
11907--11950
21
2.0
23
86
8
65
47
0
4
47
1.22
14470--14494
13
1.9
13
100
0
50
48
4
0
48
1.20
14748--14809
21
3.0
21
73
4
63
46
0
3
50
1.17
16994--17029
18
2.0
18
94
0
63
38
25
5
30
1.78
18815--18851
15
2.3
17
81
13
51
64
5
2
27
1.28
18948--18987
18
2.3
18
91
4
64
72
0
0
27
0.85
20978--21030
26
2.1
25
86
6
72
52
18
1
26
1.56
21139--21217
36
2.1
36
84
9
97
44
1
1
53
1.16
22099--22141
16
2.6
16
85
10
52
53
0
0
46
1.00

Tables:   1

The End!