Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007534.1 Hibiscus syriacus cultivar Beakdansim tig00021057_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86642

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26139--26204
3
22.0
3
100
0
132
33
0
0
66
0.92
27061--27088
2
14.0
2
100
0
56
50
0
0
50
1.00
31768--33336
30
52.4
30
81
2
1621
30
40
9
19
1.83
31866--33336
120
12.2
120
86
1
1823
30
40
9
19
1.83
33035--33082
24
2.0
24
84
8
62
33
43
8
14
1.75
34423--34569
60
2.4
59
78
8
152
32
13
17
36
1.89
37139--37299
64
2.5
65
84
7
186
32
16
22
27
1.96
38863--38922
25
2.4
25
100
0
120
18
28
25
28
1.98
40492--40540
21
2.3
21
85
0
62
16
14
38
30
1.88
40505--40553
21
2.3
21
100
0
98
14
16
42
26
1.86
51803--51842
2
20.5
2
94
5
73
50
0
0
50
1.00
54050--54111
19
3.3
19
93
2
108
43
1
0
54
1.09
59765--59789
2
12.5
2
100
0
50
48
0
0
52
1.00
63377--63410
1
34.0
1
100
0
68
100
0
0
0
0.00
71930--71983
20
2.7
20
70
0
54
24
22
11
42
1.85
71989--72028
20
2.0
21
90
5
64
35
12
17
35
1.88
76554--76731
51
3.5
51
90
1
275
26
24
17
32
1.97
76726--76969
54
4.5
54
90
0
380
18
24
20
36
1.94
77342--77465
37
3.4
37
86
2
151
24
18
22
34
1.96
78699--78924
125
1.8
125
91
0
371
26
26
16
30
1.96
82246--82396
72
2.1
72
93
0
257
23
26
13
37
1.91
83081--83188
55
2.0
55
90
0
171
21
24
11
43
1.84

Tables:   1

The End!