Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007536.1 Hibiscus syriacus cultivar Beakdansim tig00021093_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27265

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2371--2412
17
2.3
18
88
8
59
64
2
4
28
1.26
2900--2948
23
2.0
25
84
7
66
53
0
2
44
1.12
4453--4506
3
18.0
3
81
14
67
62
0
0
37
0.95
4463--4500
14
2.6
14
91
4
58
63
0
0
36
0.95
6293--6331
20
1.9
21
84
5
53
53
0
2
43
1.14
6707--6736
11
2.7
11
100
0
60
0
53
10
36
1.35
8116--8421
113
2.7
112
92
3
483
26
19
16
38
1.92
9520--9597
19
3.9
19
83
13
88
56
5
8
29
1.52
9926--9981
8
6.5
8
76
15
58
5
14
0
80
0.88
9928--9981
17
3.1
17
77
17
56
5
12
0
81
0.85
9931--9982
19
2.6
20
84
9
70
5
15
0
78
0.92
13491--13523
9
3.7
9
91
0
57
54
0
21
24
1.45
20560--20589
16
1.9
15
93
6
51
90
3
0
6
0.56
22813--22883
3
24.0
3
78
16
69
61
1
1
35
1.13
22829--22885
30
1.9
30
85
7
80
66
0
1
31
1.02
27108--27140
14
2.3
15
89
5
50
36
3
9
51
1.49

Tables:   1

The End!